Jatropha Genome Database

JcCB0389841.10 (JcS_202820.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0389841
Scaffold:
JcS_202820 JcCD0188757(+) =JcCB0389841(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SE47_RICCO 525 87.3 89.7 (tr|B9SE47) Malate dehydrogenase OS=Ricinus communis GN=RCOM_1520380 PE=3 SV=1
Arabidopsis_pep AT3G15020.2 475 78.0 86.8 | Symbols: | malate dehydrogenase (NAD), mitochondrial, putative | chr3:5056139-5057865 FORWARD
soybean_pep Glyma12g19520.1 483 80.3 87.0  
Medicago_pep IMGA|Medtr5g014880.1 374 68.0 79.6 Malate dehydrogenase, active site chr05_pseudomolecule_IMGAG_V3 4854217-4849943 F EGN_Mt090430 20090702
grape_pep GSVIVT01014231001 474 83.5 90.7  
castor_bean_cds 30150.m000471 842 87.6 87.6 malate dehydrogenase, putative
castor_bean_pep 30150.m000471 525 87.3 89.7 malate dehydrogenase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c01296 1891 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0389841.10 length: 324 aa.
IPR001236 Lactate/malate dehydrogenase
method AccNumber shortName E-value location
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation reduction    
HMMPfam PF00056 Ldh_1_N 3.7e-50 59-200
HMMPfam PF02866 Ldh_1_C 1.9e-32 203-322
IPR001252 Malate dehydrogenase, active site
Biological Process GO:0006108 malate metabolic process    
Molecular Function GO:0016615 malate dehydrogenase activity    
Biological Process GO:0055114 oxidation reduction    
PatternScan PS00068 MDH NA 202-214
IPR001557 L-lactate/malate dehydrogenase
Biological Process GO:0006096 glycolysis    
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Biological Process GO:0044262 cellular carbohydrate metabolic process    
Biological Process GO:0055114 oxidation reduction    
HMMPIR PIRSF000102 L-lactate/malate 1.4e-41 57-324
IPR010097 Malate dehydrogenase, NAD-dependent, eukaryote/gamma proteobacteria
Biological Process GO:0006108 malate metabolic process    
Molecular Function GO:0030060 L-malate dehydrogenase activity    
Biological Process GO:0055114 oxidation reduction    
HMMPanther PTHR11540:SF1 MALATE 1.9e-186 17-324
HMMTigr TIGR01772 MDH_euk_gproteo: 1.5e-131 59-324
IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Gene3D G3DSA:3.90.110.10 no description 3.8e-39 203-324
superfamily SSF56327 LDH 9.9e-36 202-323
IPR016040 NAD(P)-binding domain
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005488 binding    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.720 no description 2.9e-44 58-202
superfamily SSF51735 NAD(P)-binding 5.2e-45 39-201
no_ID  
HMMPanther PTHR11540 MALATE 1.9e-186 17-324
Seg seg seg NA 35-46
217-230