Jatropha Genome Database

JcCB0381221.10 (JcS_106958.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0381221
Scaffold:
JcS_106958 JcCA0241391(-) =JcCB0381221(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RHW5_RICCO 482 71.9 84.4 (tr|B9RHW5) Casbene synthase, chloroplast, putative OS=Ricinus communis GN=RCOM_1574190 PE=4 SV=1
Arabidopsis_pep AT5G23960.1 279 43.7 67.3 | Symbols: ATTPS21, TPS21 | TPS21 (TERPENE SYNTHASE 21); (-)-E-beta-caryophyllene synthase/ alpha-humulene synthase | chr5:8092969-8095128 FORWARD
soybean_pep Glyma12g16990.1 278 45.6 65.6  
Medicago_pep IMGA|Medtr6g008950.1 307 46.4 70.3 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid; Terpenoid synthase chr06_pseudomolecule_IMGAG_V3 1339518-1343067 E EGN_Mt090430 20090702
grape_pep GSVIVT01014566001 322 46.9 69.8  
castor_bean_cds 30169.m006276 194 78.0 78.0 Casbene synthase, chloroplast precursor, putative
castor_bean_pep 30169.m006276 482 71.9 84.4 Casbene synthase, chloroplast precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0381221.10 length: 351 aa.
IPR001906 Terpene synthase-like
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF01397 Terpene_synth 7.7e-51 11-168
IPR005630 Terpene synthase, metal-binding domain
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF03936 Terpene_synth_C 1e-43 199-342
IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
superfamily SSF48239 Terpenoid 6.5e-58 5-194
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 7.1e-62 159-347
superfamily SSF48576 Terpenoid 1.4e-59 194-347
no_ID  
Seg seg seg NA 5-23