Jatropha Genome Database

JcCB0373891.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0373891
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SAY3_RICCO 290 79.5 86.9 (tr|B9SAY3) Short chain alcohol dehydrogenase, putative OS=Ricinus communis GN=RCOM_1339260 PE=3 SV=1
Arabidopsis_pep AT1G52340.1 152 41.8 62.1 | Symbols: ABA2, SIS4, GIN1, SDR1, ISI4, SRE1, ATABA2, ATSDR1 | ABA2 (ABA DEFICIENT 2); alcohol dehydrogenase/ oxidoreductase/ xanthoxin dehydrogenase | chr1:19489997-19491527 REVERSE
soybean_pep Glyma12g09780.1 223 62.5 74.4  
Medicago_pep IMGA|Medtr7g077280.1 151 43.3 58.8 Short-chain dehydrogenase/reductase SDR chr07_pseudomolecule_IMGAG_V3 16165455-16166827 H EGN_Mt090430 20090702
grape_pep GSVIVT01036069001 237 64.2 78.6  
castor_bean_cds 30075.m001195 240 82.2 82.2 short chain alcohol dehydrogenase, putative
castor_bean_pep 30075.m001195 290 79.5 86.9 short chain alcohol dehydrogenase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c06141 56.0 85.9 85.9  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0373891.10 length: 176 aa.
IPR002198 Short-chain dehydrogenase/reductase SDR
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
HMMPanther PTHR19410 SHORT-CHAIN 7.6e-68 1-161
HMMPfam PF00106 adh_short 3e-09 1-89
IPR002347 Glucose/ribitol dehydrogenase
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation reduction    
FPrintScan PR00081 GDHRDH 2.2e-17 45-61
71-90
92-109
127-147
IPR016040 NAD(P)-binding domain
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005488 binding    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.720 no description 3.8e-37 1-163
superfamily SSF51735 NAD(P)-binding 2.2e-41 1-163
IPR020904 Short-chain dehydrogenase/reductase, conserved site
Molecular Function GO:0016491 oxidoreductase activity    
PatternScan PS00061 ADH_SHORT NA 58-86
no_ID  
HMMPanther PTHR19410:SF80 SHORT 7.6e-68 1-161
Seg seg seg NA 57-66