Jatropha Genome Database

JcCB0369011.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0369011
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RB51_RICCO 187 82.2 86.0 (tr|B9RB51) Spermidine synthase 1, putative OS=Ricinus communis GN=RCOM_1511350 PE=3 SV=1
Arabidopsis_pep AT1G23820.1 145 58.2 76.4 | Symbols: SPDS1 | SPDS1 (spermidine synthase 1); spermidine synthase | chr1:8420278-8422724 FORWARD
soybean_pep Glyma17g10010.2 151 68.6 77.1  
Medicago_pep IMGA|Medtr5g035800.1 144 60.0 79.0 Spermine synthase chr05_pseudomolecule_IMGAG_V3 14833320-14838452 E EGN_Mt090430 20090702
grape_pep GSVIVT01007787001 157 67.9 75.9  
castor_bean_cds 30147.m013976 291 86.8 86.8 spermidine synthase 1, putative
castor_bean_pep 30147.m013976 187 82.2 86.0 spermidine synthase 1, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c03171 75.8 82.1 82.1  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0369011.10 length: 158 aa.
IPR001045 Spermine synthase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
HMMPanther PTHR11558 SPERMIDINE/SPERMINE 2.8e-58 54-158
HMMPfam PF01564 Spermine_synth 1.3e-36 60-157
PatternScan PS01330 SPERMIDINE_SYNTHASE_1 NA 133-146
ProfileScan PS51006 SPERMIDINE_SYNTHASE_2 47.111 55-158
no_ID  
Gene3D G3DSA:2.30.140.10 no description 1.7e-05 53-106
Gene3D G3DSA:3.40.50.150 no description 8.4e-18 108-158
HMMPanther PTHR11558:SF11 SPERMIDINE 2.8e-58 54-158
Seg seg seg NA 34-45
134-144
superfamily SSF53335 S-adenosyl-L-methionine-dependent 8.5e-31 55-158