Jatropha Genome Database

JcCB0365851.10 (JcS_202902.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0365851
Scaffold:
JcS_202902 JcCD0094065(+) =JcCB0365851(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl A5BLF6_VITVI 157 39.9 55.0 (tr|A5BLF6) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040899 PE=4 SV=1
Arabidopsis_pep AT4G14096.1 135 32.7 51.6 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like F-box (InterPro:IPR001810), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G14103.1); Has 1300 Blast hits to 1271 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1300; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:8124606-8126202 FORWARD
soybean_pep Glyma20g28060.1 105 31.4 44.9  
Medicago_pep IMGA|Medtr3g062160.1 182 39.2 57.3 Cyclin-like F-box; FBD; chr03_pseudomolecule_IMGAG_V3 14259455-14263440 E EGN_Mt090430 20090702
grape_pep GSVIVT01038063001 125 35.6 49.3  
castor_bean_cds --No_Hits--        
castor_bean_pep 30170.m013981 95.9 33.6 51.2 ubiquitin-protein ligase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c03448 1231 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0365851.10 length: 359 aa.
IPR001810 Cyclin-like F-box
method AccNumber shortName E-value location
HMMPfam PF00646 F-box 9.5e-09 12-51
HMMSmart SM00256 no description 7.7e-07 15-54
ProfileScan PS50181 FBOX 11.061 9-43
no_ID  
Gene3D G3DSA:3.80.10.10 no description 7.4e-08 4-252
HMMPfam PF07723 LRR_2 6.3e-05 163-188
superfamily SSF52047 RNI-like 3.7e-08 69-260
superfamily SSF81383 F-box 1e-12 7-51