Jatropha Genome Database

JcCB0353461.10 (JcS_103032.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0353461
Scaffold:
JcS_103032 JcCA0150581(-) =JcCA0315371(-) =JcCB0353461(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RNR3_RICCO 423 77.0 83.3 (tr|B9RNR3) Salt-tolerance protein, putative OS=Ricinus communis GN=RCOM_0920160 PE=4 SV=1
Arabidopsis_pep AT5G24930.1 339 59.9 71.1 | Symbols: ATCOL4, COL4 | zinc finger (B-box type) family protein | chr5:8589325-8590949 FORWARD
soybean_pep Glyma17g07420.1 249 48.2 61.3  
Medicago_pep IMGA|Medtr8g128200.1 239 47.5 61.4 Zinc finger, B-box; CCT chr08_pseudomolecule_IMGAG_V3 29899260-29897234 E EGN_Mt090430 20090702
grape_pep GSVIVT01036037001 296 58.9 69.5  
castor_bean_cds 29848.m004493 141 79.9 79.9 Salt-tolerance protein, putative
castor_bean_pep 29848.m004493 423 77.0 83.3 Salt-tolerance protein, putative
JAT_13201ests gi|268518395|gb|FM888669.1|FM888669 846 99.5 99.5 FM888669 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002125, mRNA sequence
KJC_r1 KJC_c00740 1624 99.6 99.6  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0353461.10 length: 279 aa.
IPR000315 Zinc finger, B-box
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS50119 ZF_BBOX 8.902 1-31
IPR010402 CCT domain
HMMPfam PF06203 CCT 3.5e-20 216-259
ProfileScan PS51017 CCT 16.787 216-258
no_ID  
Seg seg seg NA 168-181