Jatropha Genome Database

JcCB0347911.10 (JcS_109700.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0347911
Scaffold:
JcS_109700 JcCB0347911(-) =JcCA0316521(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A5C6Y1_VITVI 603 90.8 94.0 (tr|A5C6Y1) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002724 PE=4 SV=1
Arabidopsis_pep AT3G51160.1 561 83.9 90.5 | Symbols: MUR1, MUR_1, GMD2 | MUR1 (MURUS 1); GDP-mannose 4,6-dehydratase | chr3:19007232-19008353 REVERSE
soybean_pep Glyma01g37270.1 596 90.7 95.5  
Medicago_pep IMGA|Medtr5g021700.1 591 89.5 93.0 NAD-dependent epimerase/dehydratase; Short-chain dehydrogenase/reductase SDR; GDP-mannose 4,6-dehydratase chr05_pseudomolecule_IMGAG_V3 8340648-8338692 E EGN_Mt090430 20090702
grape_pep GSVIVT01018803001 342 83.0 87.4  
castor_bean_cds 28623.m000407 295 84.3 84.3 GDP mannose-4,6-dehydratase, putative
castor_bean_pep 28623.m000407 318 94.7 97.4 GDP mannose-4,6-dehydratase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c03084 1132 99.7 99.7  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0347911.10 length: 316 aa.
IPR001509 NAD-dependent epimerase/dehydratase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0044237 cellular metabolic process    
Molecular Function GO:0050662 coenzyme binding    
HMMPfam PF01370 Epimerase 1.9e-65 30-279
IPR006368 GDP-mannose 4,6-dehydratase
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008446 GDP-mannose 4,6-dehydratase activity    
Biological Process GO:0019673 GDP-mannose metabolic process    
HMMPanther PTHR10366:SF32 GDP 1.9e-166 32-316
HMMTigr TIGR01472 gmd: 6.2e-220 28-316
IPR016040 NAD(P)-binding domain
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005488 binding    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.720 no description 5.7e-68 27-300
superfamily SSF51735 NAD(P)-binding 1e-68 27-316
no_ID  
HMMPanther PTHR10366 NAD 1.9e-166 32-316