Jatropha Genome Database

JcCB0340941.20 (JcS_102554.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0340941
Scaffold:
JcS_102554 JcCB0691491(+) =JcCB0400041(+) =JcCB0340941(+) =JcCA0271581(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SFB7_RICCO 297 92.9 94.9 (tr|B9SFB7) TRANSPORT INHIBITOR RESPONSE 1 protein, putative OS=Ricinus communis GN=RCOM_1095990 PE=4 SV=1
Arabidopsis_pep AT1G12820.1 187 58.6 73.2 | Symbols: AFB3 | AFB3 (AUXIN SIGNALING F-BOX 3); auxin binding / ubiquitin-protein ligase | chr1:4368879-4370780 REVERSE
soybean_pep Glyma08g06390.1 262 84.0 90.0  
Medicago_pep IMGA|Medtr4g124940.1 269 85.6 90.2 Cyclin-like F-box chr04_pseudomolecule_IMGAG_V3 29352485-29348732 F EGN_Mt090430 20090702
grape_pep GSVIVT01003183001 275 86.9 91.5  
castor_bean_cds 29933.m001427 539 89.5 89.5 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
castor_bean_pep 29933.m001427 297 92.9 94.9 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0340941.20 length: 158 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.80.10.10 no description 6.4e-09 7-122
HMMPanther PTHR23125 F-BOX/LEUCINE 5.9e-21 8-52
HMMPanther PTHR23125:SF17 GRR1-RELATED, 5.9e-21 8-52
superfamily SSF52047 RNI-like 8.4e-13 5-112