Jatropha Genome Database

JcCB0331501.10 (JcS_102722.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0331501
Scaffold:
JcS_102722 JcCB0961551(-) =JcCD0138510(+) =JcCB0331501(+) =JcCB0296811(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RDH6_RICCO 160 92.9 95.2 (tr|B9RDH6) Mads box protein, putative OS=Ricinus communis GN=RCOM_1612950 PE=3 SV=1
Arabidopsis_pep AT2G45650.1 91.7 60.2 71.1 | Symbols: AGL6 | AGL6 (AGAMOUS-LIKE 6); DNA binding / transcription factor | chr2:18804453-18806291 FORWARD
soybean_pep Glyma03g02210.1 139 79.8 88.1  
Medicago_pep IMGA|Medtr7g083430.1 127 77.1 86.7 Transcription factor, K-box chr07_pseudomolecule_IMGAG_V3 17802338-17805458 H EGN_Mt090430 20090702
grape_pep GSVIVT01027577001 147 85.7 92.9  
castor_bean_cds 30174.m008934 280 89.9 89.9 mads box protein, putative
castor_bean_pep 30174.m008934 160 92.9 95.2 mads box protein, putative
JAT_13201ests gi|262091321|gb|GT228748.1|GT228748 109 97.2 97.2 JC313 Jatropha seeds from fruits at three stages of maturation Jatropha curcas cDNA clone PL06SE.E07.scf 5', mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0331501.10 length: 84 aa.
IPR002487 Transcription factor, K-box
method AccNumber shortName E-value location
Molecular Function GO:0003700 transcription factor activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF01486 K-box 6.5e-23 20-79
ProfileScan PS51297 K_BOX 12.454 24-84
no_ID  
Coil coil coiled-coil NA 31-52
58-79
HMMPanther PTHR11945 MADS 7.3e-22 3-79
HMMPanther PTHR11945:SF19 MADS 7.3e-22 3-79