| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | D7U912_VITVI | 127 | 87.0 | 91.3 | (tr|D7U912) Whole genome shotgun sequence of line PN40024, scaffold_41.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00025916001 PE=4 SV=1 |
| Arabidopsis_pep | AT1G71692.1 | 119 | 76.7 | 87.7 | | Symbols: AGL12, XAL1 | AGL12 (AGAMOUS-LIKE 12); transcription factor | chr1:26952903-26954939 REVERSE |
| soybean_pep | Glyma12g00770.1 | 124 | 87.9 | 93.9 | |
| Medicago_pep | IMGA|Medtr3g013050.1 | 92.8 | 63.9 | 83.6 | Transcription factor, MADS-box; Transcription factor, K-box chr03_pseudomolecule_IMGAG_V3 2348300-2341992 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01025916001 | 127 | 87.0 | 91.3 | |
| castor_bean_cds | 29907.m000663 | 210 | 89.6 | 89.6 | mads box protein, putative |
| castor_bean_pep | 29907.m000663 | 126 | 89.4 | 93.9 | mads box protein, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCB0294021.10 | length: 113 aa. | |||
| IPR002100 | Transcription factor, MADS-box | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003700 | transcription factor activity | ||
| Cellular Component | GO:0005634 | nucleus | ||
| Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
| Molecular Function | GO:0043565 | sequence-specific DNA binding | ||
| FPrintScan | PR00404 | MADSDOMAIN | 4.5e-28 | 3-23 23-38 38-59 |
| HMMPfam | PF00319 | SRF-TF | 1.1e-23 | 9-58 |
| HMMSmart | SM00432 | no description | 3.3e-35 | 1-60 |
| PatternScan | PS00350 | MADS_BOX_1 | NA | 3-57 |
| ProfileScan | PS50066 | MADS_BOX_2 | 30.067 | 1-61 |
| superfamily | SSF55455 | SRF-like | 4.9e-24 | 1-86 |
| no_ID | ||||
| HMMPanther | PTHR11945 | MADS | 6e-33 | 10-56 |
| HMMPanther | PTHR11945:SF19 | MADS | 6e-33 | 10-56 |
| Seg | seg | seg | NA | 96-110 |