Jatropha Genome Database

JcCB0289141.10 (JcS_101057.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0289141
Scaffold:
JcS_101057 JcCB0154831(-) =JcCB0289141(+) =JcCA0317001(+) =JcCB0162471(-) =JcCB0077811(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl O24050_MESCR 266 67.8 76.9 (tr|O24050) MipE OS=Mesembryanthemum crystallinum PE=2 SV=1
Arabidopsis_pep AT2G16850.1 261 68.2 76.9 | Symbols: PIP3B, PIP2;8 | PIP2;8 (PLASMA MEMBRANE INTRINSIC PROTEIN 2;8); water channel | chr2:7301647-7303180 FORWARD
soybean_pep Glyma04g00450.1 252 65.6 77.6  
Medicago_pep IMGA|Medtr3g163530.1 255 66.7 74.9 Major intrinsic protein chr03_pseudomolecule_IMGAG_V3 42984188-42985232 E EGN_Mt090430 20090702
grape_pep GSVIVT01024010001 176 78.4 84.7  
castor_bean_cds 28962.m000437 89.7 87.1 87.1 Aquaporin PIP2.7, putative
castor_bean_pep 29869.m001194 266 68.6 77.3 Aquaporin PIP2.7, putative
JAT_13201ests gi|218687494|gb|GH296148.1|GH296148 147 100.0 100.0 JCL597 Jatropha curcas total leaf library Jatropha curcas cDNA, mRNA sequence
KJC_r1 KJC_c02389 1118 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0289141.10 length: 197 aa.
IPR000425 Major intrinsic protein
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00783 MINTRINSICP 1.9e-41 39-58
83-107
120-139
169-187
Gene3D G3DSA:1.20.1080.10 no description 2.6e-37 28-197
HMMPanther PTHR19139 AQUAPORIN 4.7e-116 3-197
HMMPfam PF00230 MIP 2.1e-52 31-196
PatternScan PS00221 MIP NA 101-109
superfamily SSF81338 Aquaporin-like 9.3e-38 28-197
no_ID  
HMMPanther PTHR19139:SF27 AQUAPORIN-RELATED 4.7e-116 3-197
Seg seg seg NA 68-79