Jatropha Genome Database

JcCB0263871.10 (JcS_101136.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0263871
Scaffold:
JcS_101136 JcCB0263871(+) =JcCB0126541(-) =JcCB0472871(+) =JcCA0133161(-) =JcCB0800111(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9S7J4_RICCO 231 63.9 70.2 (tr|B9S7J4) Ethylene-responsive transcription factor 1B, putative OS=Ricinus communis GN=RCOM_0608740 PE=4 SV=1
Arabidopsis_pep AT3G23240.1 177 47.7 63.7 | Symbols: ERF1, ATERF1 | ERF1 (ETHYLENE RESPONSE FACTOR 1); DNA binding / transcription activator/ transcription factor | chr3:8295705-8296361 FORWARD
soybean_pep Glyma10g00980.1 157 45.8 59.9  
Medicago_pep IMGA|Medtr1g042600.1 162 46.8 59.5 Pathogenesis-related transcriptional factor and ERF chr01_pseudomolecule_IMGAG_V3 9827732-9828482 E EGN_Mt090430 20090702
grape_pep GSVIVT01036201001 148 45.1 57.7  
castor_bean_cds 29680.m001678 214 86.4 86.4 Ethylene-responsive transcription factor 1B, putative
castor_bean_pep 29680.m001678 231 63.9 70.2 Ethylene-responsive transcription factor 1B, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c06864 105 85.0 85.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0263871.10 length: 214 aa.
IPR001471 Pathogenesis-related transcriptional factor/ERF, DNA-binding
method AccNumber shortName E-value location
Molecular Function GO:0003700 transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 5.4e-13 82-93
121-141
Gene3D G3DSA:3.30.730.10 no description 4.2e-23 80-142
HMMPfam PF00847 AP2 8.3e-16 82-131
HMMSmart SM00380 no description 1.7e-36 81-145
ProfileScan PS51032 AP2_ERF 22.484 81-139
IPR016177 DNA-binding, integrase-type
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 1.6e-23 80-142
no_ID  
Seg seg seg NA 3-32
115-128
171-182