| JcS_103719 | JcCA0080721(+) =JcCA0147181(-) =JcCB0263761(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9RDJ8_RICCO | 394 | 78.8 | 83.8 | (tr|B9RDJ8) DNA binding protein, putative OS=Ricinus communis GN=RCOM_1613690 PE=4 SV=1 |
| Arabidopsis_pep | AT1G01880.1 | 348 | 70.4 | 80.4 | | Symbols: | DNA repair protein, putative | chr1:306558-308991 REVERSE |
| soybean_pep | Glyma18g46230.1 | 358 | 72.3 | 80.2 | |
| Medicago_pep | IMGA|Medtr7g083910.1 | 364 | 72.6 | 80.9 | Helix-hairpin-helix motif, class 2 chr07_pseudomolecule_IMGAG_V3 18038402-18033538 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01027599001 | 367 | 74.3 | 81.7 | |
| castor_bean_cds | 30174.m008956 | 617 | 85.8 | 85.8 | DNA binding protein, putative |
| castor_bean_pep | 30174.m008956 | 394 | 78.8 | 83.8 | DNA binding protein, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCB0263761.10 | length: 256 aa. | |||
| IPR006084 | DNA repair protein (XPGC)/yeast Rad | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0004518 | nuclease activity | ||
| Biological Process | GO:0006281 | DNA repair | ||
| FPrintScan | PR00853 | XPGRADSUPER | 5.9e-21 | 25-39 70-89 127-144 148-168 203-218 |
| HMMPanther | PTHR11081 | XP-G/RAD2 | 2.8e-71 | 23-245 |
| IPR006085 | XPG N-terminal | |||
| Molecular Function | GO:0004518 | nuclease activity | ||
| Biological Process | GO:0006281 | DNA repair | ||
| HMMPfam | PF00752 | XPG_N | 7.1e-09 | 1-89 |
| HMMSmart | SM00485 | no description | 1.1e-06 | 1-96 |
| IPR006086 | XPG/RAD2 endonuclease | |||
| Molecular Function | GO:0004518 | nuclease activity | ||
| Biological Process | GO:0006281 | DNA repair | ||
| HMMPfam | PF00867 | XPG_I | 1.9e-22 | 129-213 |
| HMMSmart | SM00484 | no description | 1.8e-17 | 128-198 |
| IPR020045 | 5'-3' exonuclease, C-terminal subdomain | |||
| Molecular Function | GO:0003677 | DNA binding | ||
| Molecular Function | GO:0003824 | catalytic activity | ||
| superfamily | SSF47807 | 5' | 1.8e-07 | 198-247 |
| no_ID | ||||
| Gene3D | G3DSA:1.10.150.20 | no description | 0.00043 | 198-241 |
| Gene3D | G3DSA:3.40.50.1010 | no description | 3e-35 | 16-197 |
| HMMPanther | PTHR11081:SF5 | XP-G/RAD2 | 2.8e-71 | 23-245 |
| Seg | seg | seg | NA | 83-94 119-129 247-256 |
| superfamily | SSF88723 | PIN | 9.3e-47 | 6-213 |