Jatropha Genome Database

JcCB0259591.20 (JcS_100040.60)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0259591
Scaffold:
JcS_100040 JcCB0551471(-) =JcCB0362591(-) =JcCA0128181(+) =JcCB0392341(+) =JcCB0259591(-) =JcCB0283351(+) =JcCB0514151(+) =JcCA0153671(+) =JcCA0278051(+) =JcCB0432361(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9S6M0_RICCO 709 79.3 85.6 (tr|B9S6M0) Geranylgeranyl hydrogenase, putative OS=Ricinus communis GN=RCOM_1110740 PE=4 SV=1
Arabidopsis_pep AT1G74470.1 531 59.5 71.9 | Symbols: | geranylgeranyl reductase | chr1:27991248-27992845 FORWARD
soybean_pep Glyma02g44150.1 614 68.1 79.0  
Medicago_pep IMGA|Medtr5g094790.1 619 68.5 79.4 Geranylgeranyl reductase, plantal and prokaryotic chr05_pseudomolecule_IMGAG_V3 37548583-37550059 E EGN_Mt090430 20090702
grape_pep GSVIVT01007996001 417 58.7 70.4  
castor_bean_cds 29942.m000745 470 82.4 82.4 geranylgeranyl hydrogenase, putative
castor_bean_pep 29942.m000745 709 79.3 85.6 geranylgeranyl hydrogenase, putative
JAT_13201ests gi|268525595|gb|FM890850.1|FM890850 809 97.8 97.8 FM890850 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000804, mRNA sequence
KJC_r1 KJC_c00739 89.7 90.4 90.4  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0259591.20 length: 445 aa.
IPR003042 Aromatic-ring hydroxylase-like
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
FPrintScan PR00420 RNGMNOXGNASE 2.8e-12 40-62
181-196
302-317
IPR010253 Geranylgeranyl reductase
Biological Process GO:0015979 photosynthesis    
Biological Process GO:0015995 chlorophyll biosynthetic process    
Molecular Function GO:0045550 geranylgeranyl reductase activity    
HMMTigr TIGR02023 BchP-ChlP: 4e-203 39-432
IPR011774 Geranylgeranyl reductase, plant/cyanobacteria
HMMTigr TIGR02028 ChlP: 2.6e-278 39-432
IPR011777 Geranylgeranyl reductase, plant/prokaryotic
HMMTigr TIGR02032 GG-red-SF: 5.5e-45 43-337
no_ID  
Gene3D G3DSA:3.50.50.60 no description 3.7e-21 37-367
HMMPanther PTHR10617 FLAVOPROTEIN-UBIQUINONE 6e-170 73-445
HMMPanther PTHR10617:SF9 GERANYLGERANYL 6e-170 73-445
Seg seg seg NA 41-61
superfamily SSF51905 FAD/NAD(P)-binding 2e-30 37-419