Jatropha Genome Database

JcCB0249071.10 (JcS_110269.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0249071
Scaffold:
JcS_110269 JcCB0455931(+) =JcCB0249071(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9R6U5_RICCO 691 72.6 80.8 (tr|B9R6U5) Acc synthase, putative OS=Ricinus communis GN=RCOM_1585600 PE=3 SV=1
Arabidopsis_pep AT4G37770.1 626 65.0 76.7 | Symbols: ACS8 | ACS8; 1-aminocyclopropane-1-carboxylate synthase | chr4:17752222-17753925 FORWARD
soybean_pep Glyma17g16990.1 629 65.6 77.6  
Medicago_pep IMGA|Medtr5g015160.1 608 62.9 76.9 Aminotransferases class-I pyridoxal-phosphate-binding site; ; chr05_pseudomolecule_IMGAG_V3 4998200-4995857 E EGN_Mt090430 20090702
grape_pep GSVIVT01009284001 616 65.3 75.7  
castor_bean_cds 30170.m013658 323 83.9 83.9 acc synthase, putative
castor_bean_pep 30170.m013658 691 72.6 80.8 acc synthase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0249071.10 length: 464 aa.
IPR001176 1-aminocyclopropane-1-carboxylate synthase
method AccNumber shortName E-value location
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity    
FPrintScan PR00753 ACCSYNTHASE 8.4e-101 41-67
74-90
111-131
133-154
187-211
223-246
262-286
294-317
IPR004839 Aminotransferase, class I/II
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016769 transferase activity, transferring nitrogenous groups    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00155 Aminotran_1_2 2.7e-97 40-423
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 3.3e-63 61-317
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 1.8e-09 322-433
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
superfamily SSF53383 PLP-dependent 3.6e-103 1-428
no_ID  
HMMPanther PTHR11751 SUBGROUP 2.2e-198 65-432
HMMPanther PTHR11751:SF26 ACC 2.2e-198 65-432
Seg seg seg NA 325-337