Jatropha Genome Database

JcCB0247731.10 (JcS_102254.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0247731
Scaffold:
JcS_102254 JcCB0362691(-) =JcCB0311841(-) =JcCD0056747(-) =JcCB0247731(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9T434_RICCO 365 92.0 95.7 (tr|B9T434) Diaminopimelate epimerase, putative OS=Ricinus communis GN=RCOM_0294430 PE=3 SV=1
Arabidopsis_pep AT3G53580.1 330 81.8 90.4 | Symbols: | diaminopimelate epimerase family protein | chr3:19864784-19866907 FORWARD
soybean_pep Glyma19g35780.1 322 76.5 90.9  
Medicago_pep IMGA|Medtr7g077770.1 184 51.1 63.4 Diaminopimelate epimerase chr07_pseudomolecule_IMGAG_V3 16473695-16469850 E EGN_Mt090430 20090702
grape_pep GSVIVT01025612001 349 87.7 95.2  
castor_bean_cds 28637.m000206 557 87.7 87.7 Diaminopimelate epimerase, putative
castor_bean_pep 28637.m000206 365 92.0 95.7 Diaminopimelate epimerase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0247731.10 length: 187 aa.
IPR001653 Diaminopimelate epimerase
method AccNumber shortName E-value location
Cellular Component GO:0005737 cytoplasm    
Molecular Function GO:0008837 diaminopimelate epimerase activity    
Biological Process GO:0009089 lysine biosynthetic process via diaminopimelate    
HMMPfam PF01678 DAP_epimerase 8.2e-29 1-108
HMMTigr TIGR00652 DapF: 1.1e-26 1-187
IPR018510 Diaminopimelate epimerase, active site
Cellular Component GO:0005737 cytoplasm    
Molecular Function GO:0008837 diaminopimelate epimerase activity    
Biological Process GO:0009089 lysine biosynthetic process via diaminopimelate    
PatternScan PS01326 DAP_EPIMERASE NA 49-63
no_ID  
Gene3D G3DSA:3.10.310.10 no description 6.1e-28 1-113
superfamily SSF54506 Diaminopimelate 2e-09 1-116
121-186