Jatropha Genome Database

JcCB0234681.10 (JcS_105679.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0234681
Scaffold:
JcS_105679 JcCB0912291(+) =JcCA0271791(+) =JcCB0234681(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9RIY4_RICCO 245 71.8 76.5 (tr|B9RIY4) Mads box protein, putative OS=Ricinus communis GN=RCOM_1751300 PE=3 SV=1
Arabidopsis_pep AT5G23260.2 130 42.7 56.8 | Symbols: TT16, ABS | TT16 (TRANSPARENT TESTA16); transcription factor | chr5:7836442-7838340 FORWARD
soybean_pep Glyma20g00400.1 86.7 35.8 48.9  
Medicago_pep IMGA|Medtr1g046070.1 85.9 34.4 50.0 Transcription factor, MADS-box; Transcription factor, K-box chr01_pseudomolecule_IMGAG_V3 10653449-10650286 E EGN_Mt090430 20090702
grape_pep GSVIVT01012110001 132 43.3 56.7  
castor_bean_cds 30221.m002218 343 86.8 86.8 mads box protein, putative
castor_bean_pep 30221.m002218 245 71.8 76.5 mads box protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0234681.10 length: 152 aa.
IPR002487 Transcription factor, K-box
method AccNumber shortName E-value location
Molecular Function GO:0003700 transcription factor activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF01486 K-box 7.6e-16 24-86
ProfileScan PS51297 K_BOX 12.049 3-94
no_ID  
Coil coil coiled-coil NA 38-84
Seg seg seg NA 39-49