Jatropha Genome Database

JcCB0226331.10 (JcS_105891.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0226331
Scaffold:
JcS_105891 JcCD0170098(+) =JcCB0226331(+) =JcCB0175021(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SZJ0_RICCO 322 73.2 75.7 (tr|B9SZJ0) Cyclin d, putative OS=Ricinus communis GN=RCOM_0394330 PE=3 SV=1
Arabidopsis_pep AT1G70210.1 248 57.9 69.7 | Symbols: CYCD1;1 | CYCD1;1 (CYCLIN D1;1); cyclin-dependent protein kinase regulator | chr1:26440015-26441980 FORWARD
soybean_pep Glyma02g03490.1 312 71.5 77.4  
Medicago_pep IMGA|Medtr5g036580.1 308 70.6 77.8 Cyclin, N-terminal; chr05_pseudomolecule_IMGAG_V3 15257494-15261890 E EGN_Mt090430 20090702
grape_pep GSVIVT01020167001 322 73.6 80.9  
castor_bean_cds 29168.m000387 430 87.6 87.6 cyclin d, putative
castor_bean_pep 29168.m000387 322 73.2 75.7 cyclin d, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c05591 948 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0226331.10 length: 227 aa.
IPR004367 Cyclin, C-terminal
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
HMMPfam PF02984 Cyclin_C 1.9e-14 64-162
IPR006671 Cyclin, N-terminal
HMMPfam PF00134 Cyclin_N 2.9e-14 3-61
IPR011028 Cyclin-like
superfamily SSF47954 Cyclin-like 9.4e-08 5-62
64-172
IPR013763 Cyclin-related
Gene3D G3DSA:1.10.472.10 no description 3.7e-11 7-62
IPR015451 Cyclin D
HMMPanther PTHR10177:SF12 CYCLIN 2.9e-56 7-207
no_ID  
HMMPanther PTHR10177 CYCLINS 2.9e-56 7-207
Seg seg seg NA 112-121
183-200