Jatropha Genome Database

JcCB0224701.10 (JcS_102242.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0224701
Scaffold:
JcS_102242 JcCB0358041(+) =JcCB0224701(-) =JcCB0025091(-) =JcCA0115811(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A9ZN13_HEVBR 321 77.5 80.9 (tr|A9ZN13) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Hevea brasiliensis GN=HbMCS PE=2 SV=1
Arabidopsis_pep AT1G63970.1 247 86.0 91.2 | Symbols: ISPF, MECPS | ISPF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | chr1:23738923-23740336 REVERSE
soybean_pep Glyma11g02380.1 248 80.1 86.3  
Medicago_pep IMGA|Medtr5g010080.1 249 80.7 87.6 MECDP-synthase chr05_pseudomolecule_IMGAG_V3 2402451-2407020 E EGN_Mt090430 20090702
grape_pep GSVIVT01019415001 253 90.2 95.5  
castor_bean_cds 30190.m011273 293 91.2 91.2 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, putative
castor_bean_pep 30190.m011273 190 54.8 56.3 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, putative
JAT_13201ests gi|237680745|gb|GO246957.1|GO246957 617 95.3 95.3 JcrME_RL0501 Expressed sequence tags from Jatropha curcas root cDNA library Jatropha curcas cDNA, mRNA sequence
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0224701.10 length: 223 aa.
IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core
method AccNumber shortName E-value location
Molecular Function GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity    
Biological Process GO:0016114 terpenoid biosynthetic process    
Gene3D G3DSA:3.30.1330.50 no description 4.1e-42 103-223
HAMAP MF_00107 ISPF_MF_00107 22.778 103-223
HMMPfam PF02542 YgbB 9.6e-49 103-223
HMMTigr TIGR00151 ispF: 1.3e-52 104-223
superfamily SSF69765 2C-methyl-D-erythritol 1.9e-46 103-223
IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site
PatternScan PS01350 ISPF NA 137-152
no_ID  
Seg seg seg NA 36-53
67-76