Jatropha Genome Database

JcCB0224601.10 (JcS_101416.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0224601
Scaffold:
JcS_101416 JcCB0886671(+) =JcCB0224601(+) =JcCB0424221(-) =JcCB0084431(-) =JcCA0257171(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RMP7_RICCO 236 69.3 78.2 (tr|B9RMP7) Two-component sensor histidine kinase bacteria, putative OS=Ricinus communis GN=RCOM_1082510 PE=4 SV=1
Arabidopsis_pep AT1G67710.1 197 58.6 68.8 | Symbols: ARR11 | ARR11 (RESPONSE REGULATOR 11); transcription factor/ two-component response regulator | chr1:25376994-25378905 REVERSE
soybean_pep Glyma18g01430.1 218 63.9 74.4  
Medicago_pep IMGA|Medtr3g102990.1 218 62.8 74.4 Myb, DNA-binding; Response regulator receiver; Response regulator, RegA/PrrA/ActR type; Homeodomain-related chr03_pseudomolecule_IMGAG_V3 25254714-25258529 E EGN_Mt090430 20090702
grape_pep GSVIVT01010300001 222 65.4 76.0  
castor_bean_cds 29929.m004752 206 85.0 85.0 two-component sensor histidine kinase bacteria, putative
castor_bean_pep 29929.m004752 236 69.3 78.2 two-component sensor histidine kinase bacteria, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c04504 54.0 89.4 89.4  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0224601.10 length: 180 aa.
IPR001789 Signal transduction response regulator, receiver domain
method AccNumber shortName E-value location
Molecular Function GO:0000156 two-component response regulator activity    
Biological Process GO:0000160 two-component signal transduction system (phosphorelay)    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF00072 Response_reg 1.5e-17 6-84
HMMSmart SM00448 no description 0.00082 1-86
ProfileScan PS50110 RESPONSE_REGULATORY 25.057 1-90
IPR011006 CheY-like
superfamily SSF52172 CheY-like 9.5e-21 6-90
no_ID  
Gene3D G3DSA:3.40.50.2300 no description 1.7e-15 6-90
HMMPanther PTHR23283 SENSOR 9e-13 6-94
HMMPanther PTHR23283:SF31 SENSOR 9e-13 6-94