Jatropha Genome Database

JcCB0223221.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0223221
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl D7TCY0_VITVI 304 62.1 81.1 (tr|D7TCY0) Whole genome shotgun sequence of line PN40024, scaffold_80.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00036171001 PE=4 SV=1
Arabidopsis_pep AT4G33790.1 277 59.5 76.2 | Symbols: CER4, G7, FAR3 | CER4 (ECERIFERUM 4); fatty acyl-CoA reductase (alcohol-forming)/ oxidoreductase, acting on the CH-CH group of donors | chr4:16204325-16207891 REVERSE
soybean_pep Glyma11g19170.1 299 62.6 80.6  
Medicago_pep IMGA|AC235092_8.1 296 63.0 79.3 Male sterility C-terminal AC235092.1 28952-25589 E EGN_Mt090430 20090702
grape_pep GSVIVT01036171001 304 62.1 81.1  
castor_bean_cds 29791.m000526 87.7 83.6 83.6 oxidoreductase, acting on the CH-CH group of donors, putative
castor_bean_pep 29791.m000527 300 62.6 81.1 Male sterility protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0223221.10 length: 266 aa.
IPR013120 Male sterility, NAD-binding
method AccNumber shortName E-value location
HMMPfam PF07993 NAD_binding_4 5.6e-45 17-198
IPR016040 NAD(P)-binding domain
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0005488 binding    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.720 no description 5.4e-08 9-168
superfamily SSF51735 NAD(P)-binding 1.4e-16 1-171
no_ID  
HMMPanther PTHR11011 MALE 3.5e-94 1-227
HMMPanther PTHR11011:SF1 MALE 3.5e-94 1-227
Seg seg seg NA 228-242