Jatropha Genome Database

JcCB0200451.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0200451
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl A9PAI5_POPTR 499 68.7 76.9 (tr|A9PAI5) Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1
Arabidopsis_pep AT5G67260.1 373 53.7 67.9 | Symbols: CYCD3;2 | CYCD3;2 (CYCLIN D3;2); cyclin-dependent protein kinase | chr5:26836313-26837665 FORWARD
soybean_pep Glyma05g20990.1 400 56.1 68.7  
Medicago_pep IMGA|Medtr3g147210.1 328 52.0 67.0 Cyclin, N-terminal; chr03_pseudomolecule_IMGAG_V3 38034798-38033266 F EGN_Mt090430 20090702
grape_pep GSVIVT01003175001 423 59.4 73.4  
castor_bean_cds 29970.m000980 722 85.4 85.4 cyclin d, putative
castor_bean_pep 29970.m000980 477 81.6 87.9 cyclin d, putative
JAT_13201ests gi|268524108|gb|FM894787.1|FM894787 999 96.7 96.7 FM894787 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000656, mRNA sequence
KJC_r1 KJC_c03738 79.8 80.2 80.2  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0200451.10 length: 371 aa.
IPR004367 Cyclin, C-terminal
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
HMMPfam PF02984 Cyclin_C 6.7e-14 195-305
IPR006670 Cyclin
HMMSmart SM00385 no description 4.1e-13 98-186
IPR006671 Cyclin, N-terminal
HMMPfam PF00134 Cyclin_N 4.5e-28 89-193
IPR011028 Cyclin-like
superfamily SSF47954 Cyclin-like 6.3e-34 60-193
IPR013763 Cyclin-related
Gene3D G3DSA:1.10.472.10 no description 1.1e-24 84-193
IPR015451 Cyclin D
HMMPanther PTHR10177:SF12 CYCLIN 6.2e-88 92-355
no_ID  
HMMPanther PTHR10177 CYCLINS 6.2e-88 92-355
Seg seg seg NA 24-32
332-342