Jatropha Genome Database

JcCB0188331.10 (JcS_107408.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0188331
Scaffold:
JcS_107408 JcCA0286981(+) =JcCB0188331(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl D7MGP9_ARALY 180 80.0 90.0 (tr|D7MGP9) Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_657631 PE=4 SV=1
Arabidopsis_pep AT4G24580.1 179 79.0 90.0 | Symbols: REN1 | REN1 (ROP1 ENHANCER 1); Rho GTPase activator/ Rho GTPase binding / phosphoinositide binding | chr4:12687879-12694248 REVERSE
soybean_pep Glyma04g09780.1 161 71.0 85.0  
Medicago_pep IMGA|Medtr5g096580.1 158 72.0 84.0 RhoGAP; Pleckstrin homology-type chr05_pseudomolecule_IMGAG_V3 38375642-38385231 E EGN_Mt090430 20090702
grape_pep GSVIVT01009151001 168 74.1 82.4  
castor_bean_cds 29908.m006240 252 90.6 90.6 conserved hypothetical protein
castor_bean_pep 29908.m006240 176 80.0 85.7 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c06943 58.0 82.5 82.5  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0188331.10 length: 136 aa.
IPR000198 RhoGAP
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007165 signal transduction    
Gene3D G3DSA:1.10.555.10 no description 2.1e-11 1-136
HMMPfam PF00620 RhoGAP 2.4e-15 10-121
ProfileScan PS50238 RHOGAP 16.399 1-136
IPR008936 Rho GTPase activation protein
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007165 signal transduction    
superfamily SSF48350 GTPase 5.8e-13 11-136
no_ID  
HMMPanther PTHR23176 RHO/RAC/CDC 3e-10 14-123