Jatropha Genome Database

JcCB0186651.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0186651
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9S5D2_RICCO 164 41.0 47.9 (tr|B9S5D2) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1569020 PE=4 SV=1
Arabidopsis_pep AT1G67260.2 112 43.9 53.5 | Symbols: TCP1 | TCP1; DNA binding / transcription factor | chr1:25168152-25169307 REVERSE
soybean_pep Glyma13g07480.1 124 43.2 52.8  
Medicago_pep IMGA|AC233675_3.1 81.6 56.7 81.7 TCP transcription factor AC233675.1 11574-12645 E EGN_Mt090430 20090702
grape_pep GSVIVT01036449001 108 57.8 67.6  
castor_bean_cds 30167.m000856 117 85.3 85.3 conserved hypothetical protein
castor_bean_pep 30167.m000856 164 41.0 47.9 conserved hypothetical protein
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0186651.10 length: 353 aa.
IPR005333 Transcription factor, TCP
method AccNumber shortName E-value location
HMMPfam PF03634 TCP 9e-42 109-246
IPR017887 Transcription factor TCP subgroup
ProfileScan PS51369 TCP 34.852 111-169
IPR017888 CYC/TB1, R domain
ProfileScan PS51370 R 10.643 225-242
no_ID  
Coil coil coiled-coil NA 208-229
Seg seg seg NA 11-31
47-66
89-100
174-184
207-217
263-274
298-313