| JcS_108286 | JcPR04JLQWE(+) =JcCB0185851(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | B9SMY1_RICCO | 118 | 95.0 | 100.0 | (tr|B9SMY1) Mads box protein, putative OS=Ricinus communis GN=RCOM_0482400 PE=3 SV=1 |
| Arabidopsis_pep | AT3G57230.1 | 111 | 90.0 | 98.3 | | Symbols: AGL16 | AGL16 (AGAMOUS-LIKE 16); transcription factor | chr3:21177710-21180671 FORWARD |
| soybean_pep | Glyma02g38090.1 | 120 | 96.7 | 100.0 | |
| Medicago_pep | IMGA|Medtr5g075940.1 | 116 | 95.1 | 96.7 | Transcription factor, MADS-box chr05_pseudomolecule_IMGAG_V3 27695434-27696514 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01009219001 | 115 | 96.7 | 100.0 | |
| castor_bean_cds | 29596.m000699 | 202 | 89.0 | 89.0 | mads box protein, putative |
| castor_bean_pep | 29596.m000699 | 118 | 95.0 | 100.0 | mads box protein, putative |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCB0185851.10 | length: 63 aa. | |||
| IPR002100 | Transcription factor, MADS-box | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003700 | transcription factor activity | ||
| Cellular Component | GO:0005634 | nucleus | ||
| Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
| Molecular Function | GO:0043565 | sequence-specific DNA binding | ||
| FPrintScan | PR00404 | MADSDOMAIN | 2.6e-29 | 3-23 23-38 38-59 |
| HMMPfam | PF00319 | SRF-TF | 7.2e-27 | 10-59 |
| HMMSmart | SM00432 | no description | 3.7e-40 | 1-60 |
| PatternScan | PS00350 | MADS_BOX_1 | NA | 3-57 |
| ProfileScan | PS50066 | MADS_BOX_2 | 31.651 | 1-61 |
| superfamily | SSF55455 | SRF-like | 1.1e-25 | 1-61 |
| no_ID | ||||
| HMMPanther | PTHR11945 | MADS | 1.6e-38 | 10-61 |
| HMMPanther | PTHR11945:SF19 | MADS | 1.6e-38 | 10-61 |