Jatropha Genome Database

JcCB0175951.10 (JcS_108711.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0175951
Scaffold:
JcS_108711 JcCB0175951(-) =JcCB0607871(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9SRA2_RICCO 911 84.8 91.6 (tr|B9SRA2) Hmg-CoA reductase, putative OS=Ricinus communis GN=RCOM_0612970 PE=3 SV=1
Arabidopsis_pep AT1G76490.1 810 76.0 88.1 | Symbols: HMG1, HMGR1 | HMG1 (HYDROXY METHYLGLUTARYL COA REDUCTASE 1); hydroxymethylglutaryl-CoA reductase | chr1:28695801-28698206 FORWARD
soybean_pep Glyma02g44070.1 841 78.0 88.9  
Medicago_pep IMGA|Medtr8g087140.1 836 76.6 87.0 Hydroxymethylglutaryl-coenzyme A reductase chr08_pseudomolecule_IMGAG_V3 18049162-18045484 E EGN_Mt090430 20090702
grape_pep GSVIVT01026444001 849 80.3 89.0  
castor_bean_cds 29682.m000571 1005 85.2 85.2 hmg-CoA reductase, putative
castor_bean_pep 29682.m000571 911 84.8 91.6 hmg-CoA reductase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c06000 763 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0175951.10 length: 514 aa.
IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic
method AccNumber shortName E-value location
Molecular Function GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity    
Biological Process GO:0015936 coenzyme A metabolic process    
Molecular Function GO:0050662 coenzyme binding    
Biological Process GO:0055114 oxidation reduction    
FPrintScan PR00071 HMGCOARDTASE 1.3e-86 160-181
187-207
278-296
318-343
369-395
423-444
Gene3D G3DSA:3.90.770.10 no description 1.8e-84 171-503
HMMPanther PTHR10572 HMG-COA 0 1-514
HMMPfam PF00368 HMG-CoA_red 4.1e-163 126-504
PatternScan PS00066 HMG_COA_REDUCTASE_1 NA 280-294
PatternScan PS00318 HMG_COA_REDUCTASE_2 NA 435-442
PatternScan PS01192 HMG_COA_REDUCTASE_3 NA 489-502
ProfileScan PS50065 HMG_COA_REDUCTASE_4 141.258 100-504
IPR004554 Hydroxymethylglutaryl-CoA reductase, class I, catalytic
Molecular Function GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity    
Biological Process GO:0008299 isoprenoid biosynthetic process    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0050661 NADP or NADPH binding    
Biological Process GO:0055114 oxidation reduction    
HMMTigr TIGR00533 HMG_CoA_R_NADP: 5.9e-207 98-504
IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding
Biological Process GO:0015936 coenzyme A metabolic process    
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Molecular Function GO:0050662 coenzyme binding    
Biological Process GO:0055114 oxidation reduction    
superfamily SSF55035 NAD-binding 4.3e-56 221-337
IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding
Biological Process GO:0015936 coenzyme A metabolic process    
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Molecular Function GO:0050662 coenzyme binding    
Biological Process GO:0055114 oxidation reduction    
superfamily SSF56542 Substrate-binding 1.4e-102 77-494