Jatropha Genome Database

JcCB0172401.10 (JcS_110980.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0172401
Scaffold:
JcS_110980 JcCB0061171(-) =JcCB0172401(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9MVK7_POPTR 223 71.0 78.1 (tr|B9MVK7) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_917649 PE=4 SV=1
Arabidopsis_pep AT2G26540.1 183 61.6 70.9 | Symbols: HEMD | HEMD; uroporphyrinogen-III synthase | chr2:11287666-11290224 REVERSE
soybean_pep Glyma06g04070.1 195 67.5 74.8  
Medicago_pep IMGA|Medtr3g148200.1 194 65.1 76.3 Uroporphyrinogen III synthase HEM4 chr03_pseudomolecule_IMGAG_V3 38534730-38540198 E EGN_Mt090430 20090702
grape_pep GSVIVT01009559001 202 66.4 76.3  
castor_bean_cds 30170.m013921 252 88.1 88.1 methylcobalamin:com methyltransferase, putative
castor_bean_pep 30170.m013921 164 87.8 94.4 methylcobalamin:com methyltransferase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0172401.10 length: 165 aa.
IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase
method AccNumber shortName E-value location
Molecular Function GO:0004852 uroporphyrinogen-III synthase activity    
Biological Process GO:0033014 tetrapyrrole biosynthetic process    
HMMPfam PF02602 HEM4 3.5e-28 4-160
superfamily SSF69618 Uroporphyrinogen 1.8e-19 5-158
no_ID  
HMMPanther PTHR21091 METHYLTETRAHYDROFOLATE:HOMOCYSTEINE 1.7e-79 2-152
HMMPanther PTHR21091:SF25 UROPORPHYRINOGEN 1.7e-79 2-152
Seg seg seg NA 104-122