Jatropha Genome Database

JcCB0155391.10 (JcS_100017.60)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0155391
Scaffold:
JcS_100017 JcCB0444641(-) =JcCB0762541(-) =JcCB0421491(-) =JcCB0795211(+) =JcCA0305361(+) =JcCB0484021(-) =JcCB0353721(-) =JcCB0700081(-) =JcCB0155391(-) =JcCB0216421(-) =JcCD0049927(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SXC3_RICCO 533 70.9 81.0 (tr|B9SXC3) Phospholipase d delta, putative OS=Ricinus communis GN=RCOM_0783110 PE=4 SV=1
Arabidopsis_pep AT4G35790.1 425 58.1 73.1 | Symbols: ATPLDDELTA, PLDDELTA | ATPLDDELTA; phospholipase D | chr4:16955774-16959875 REVERSE
soybean_pep Glyma11g08640.1 465 61.7 75.7  
Medicago_pep IMGA|Medtr5g023030.1 449 62.7 76.6 C2 chr05_pseudomolecule_IMGAG_V3 9013048-9022609 E EGN_Mt090430 20090702
grape_pep GSVIVT01005195001 461 62.0 77.1  
castor_bean_cds 29784.m000369 260 81.0 81.0 phospholipase d delta, putative
castor_bean_pep 29784.m000369 533 70.9 81.0 phospholipase d delta, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c03844 1059 88.0 88.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0155391.10 length: 376 aa.
IPR000008 C2 calcium-dependent membrane targeting
method AccNumber shortName E-value location
HMMPfam PF00168 C2 2.5e-18 19-137
HMMSmart SM00239 no description 1.2e-12 18-153
IPR008973 C2 calcium/lipid-binding domain, CaLB
superfamily SSF49562 C2 2e-22 12-181
IPR015679 Phospholipase D
HMMPanther PTHR18896 PHOSPHOLIPASE 2.9e-151 60-357
IPR018029 C2 membrane targeting protein
ProfileScan PS50004 C2 9.554 19-138
no_ID  
Gene3D G3DSA:2.60.40.150 no description 3.4e-12 15-158
HMMPanther PTHR18896:SF13 PHOSPHOLIPASE 2.9e-151 60-357
Seg seg seg NA 40-60