Jatropha Genome Database

JcCB0149421.10 (JcS_109149.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0149421
Scaffold:
JcS_109149 JcCB0248981(+) =JcCB0149421(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9I5I1_POPTR 447 55.0 68.3 (tr|B9I5I1) Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_243072 PE=4 SV=1
Arabidopsis_pep AT5G23960.1 300 38.1 56.9 | Symbols: ATTPS21, TPS21 | TPS21 (TERPENE SYNTHASE 21); (-)-E-beta-caryophyllene synthase/ alpha-humulene synthase | chr5:8092969-8095128 FORWARD
soybean_pep Glyma12g16990.1 292 37.6 57.7  
Medicago_pep IMGA|Medtr5g081450.1 309 38.7 58.9 Terpene synthase-like; Terpenoid synthase chr05_pseudomolecule_IMGAG_V3 30599999-30603716 E EGN_Mt090430 20090702
grape_pep GSVIVT01014569001 356 43.4 61.6  
castor_bean_cds 30169.m006314 75.8 88.6 88.6 Casbene synthase, chloroplast precursor, putative
castor_bean_pep 30169.m006314 426 51.2 68.0 Casbene synthase, chloroplast precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0149421.10 length: 380 aa.
IPR001906 Terpene synthase-like
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF01397 Terpene_synth 3.1e-17 3-68
IPR005630 Terpene synthase, metal-binding domain
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF03936 Terpene_synth_C 5.6e-06 98-281
283-324
IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
superfamily SSF48239 Terpenoid 4.7e-27 3-93
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 1.5e-108 72-378
superfamily SSF48576 Terpenoid 1.4e-105 94-378