| JcS_105666 | JcCB0897611(-) =JcCB0129921(-) =JcCA0155271(-) |
| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| trembl | A5B5A8_VITVI | 179 | 33.4 | 50.8 | (tr|A5B5A8) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034261 PE=4 SV=1 |
| Arabidopsis_pep | AT1G43760.1 | 72.0 | 27.1 | 46.9 | | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G40390.1); Has 2614 Blast hits to 2551 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 1517; Fungi - 2; Plants - 1086; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). | chr1:16528880-16531065 REVERSE |
| soybean_pep | Glyma06g19130.1 | 181 | 35.0 | 52.0 | |
| Medicago_pep | IMGA|Medtr2g006470.1 | 96.7 | 29.2 | 47.0 | RNA-directed DNA polymerase (reverse transcriptase), related chr02_pseudomolecule_IMGAG_V3 658583-659590 E EGN_Mt090430 20090702 |
| grape_pep | GSVIVT01004252001 | 104 | 30.3 | 48.0 | |
| castor_bean_cds | --No_Hits-- | ||||
| castor_bean_pep | 30221.m002228 | 86.3 | 31.3 | 51.3 | conserved hypothetical protein |
| JAT_13201ests | --No_Hits-- | ||||
| KJC_r1 | --No_Hits-- |
| JcCB0129921.10 | length: 963 aa. | |||
| IPR000477 | RNA-directed DNA polymerase (reverse transcriptase) | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003723 | RNA binding | ||
| Molecular Function | GO:0003964 | RNA-directed DNA polymerase activity | ||
| Biological Process | GO:0006278 | RNA-dependent DNA replication | ||
| HMMPfam | PF00078 | RVT_1 | 1.1e-10 | 558-664 |
| IPR015706 | RNA-directed DNA polymerase (reverse transcriptase), related | |||
| HMMPanther | PTHR19446 | REVERSE | 1.7e-63 | 169-898 |
| no_ID | ||||
| HMMPanther | PTHR19446:SF34 | NON-LTR | 1.7e-63 | 169-898 |
| Seg | seg | seg | NA | 106-134 659-670 837-849 |