Jatropha Genome Database

JcCB0124021.20 (JcS_108436.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0124021
Scaffold:
JcS_108436 JcCB0124021(+) =JcCA0125551(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SRD2_RICCO 874 78.7 84.1 (tr|B9SRD2) F-box/leucine rich repeat protein, putative OS=Ricinus communis GN=RCOM_0614170 PE=4 SV=1
Arabidopsis_pep AT2G42620.1 652 61.8 73.4 | Symbols: MAX2, ORE9, PP2 | MAX2 (MORE AXILLARY BRANCHES 2); ubiquitin-protein ligase | chr2:17756170-17758251 FORWARD
soybean_pep Glyma06g43000.1 671 63.3 75.0  
Medicago_pep IMGA|Medtr4g109790.1 644 61.0 71.8 Cyclin-like F-box chr04_pseudomolecule_IMGAG_V3 24681704-24684263 E EGN_Mt090430 20090702
grape_pep GSVIVT01020711001 712 66.6 77.0  
castor_bean_cds 29682.m000601 511 86.5 86.5 F-box/leucine rich repeat protein, putative
castor_bean_pep 29682.m000601 874 78.7 84.1 F-box/leucine rich repeat protein, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c07572 1136 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0124021.20 length: 550 aa.
IPR006553 Leucine-rich repeat, cysteine-containing subtype
method AccNumber shortName E-value location
HMMSmart SM00367 no description 1.9 152-177
208-233
234-259
no_ID  
Gene3D G3DSA:3.80.10.10 no description 3.1e-06 32-202
205-298
HMMPanther PTHR23125 F-BOX/LEUCINE 1.6e-13 12-297
Seg seg seg NA 154-163
superfamily SSF52047 RNI-like 1.6e-16 25-388