Jatropha Genome Database

JcCB0118121.20 (JcS_104722.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0118121
Scaffold:
JcS_104722 JcCB0385401(+) =JcCA0264961(-) =JcCB0118121(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl Q0GA81_9ROSI 1458 99.0 99.3 (tr|Q0GA81) Phenylalanine ammonia-lyase OS=Jatropha curcas GN=PAL PE=3 SV=1
Arabidopsis_pep AT3G53260.1 1257 85.3 93.2 | Symbols: PAL2, ATPAL2 | PAL2; phenylalanine ammonia-lyase | chr3:19744256-19746619 REVERSE
soybean_pep Glyma19g36620.1 1298 87.1 93.5  
Medicago_pep IMGA|Medtr1g076720.1 1274 85.9 93.1 Phenylalanine/histidine ammonia-lyase chr01_pseudomolecule_IMGAG_V3 15395552-15390975 F EGN_Mt090430 20090702
grape_pep GSVIVT01024292001 583 81.4 85.7  
castor_bean_cds 30078.m002319 1792 85.9 85.9 Phenylalanine ammonia-lyase, putative
castor_bean_pep 30078.m002319 1364 91.5 95.7 Phenylalanine ammonia-lyase, putative
JAT_13201ests gi|257030982|gb|GT008283.1|GT008283 119 81.7 81.7 TransId-237491 CAET42MIX Coffea arabica cDNA clone CAET42MIX-CFEXV72TV similar to Phenylalanine ammonia lyase - Jatropha curcas, mRNA sequence
KJC_r1 KJC_c04088 1187 99.7 99.7  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0118121.20 length: 713 aa.
IPR001106 Phenylalanine/histidine ammonia-lyase
method AccNumber shortName E-value location
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016211 ammonia ligase activity    
HMMPfam PF00221 PAL 3.4e-175 53-545
PatternScan PS00488 PAL_HISTIDASE NA 195-211
IPR005922 Phenylalanine ammonia-lyase
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006559 L-phenylalanine catabolic process    
Molecular Function GO:0016841 ammonia-lyase activity    
HMMTigr TIGR01226 phe_am_lyase: 0 22-703
IPR008948 L-Aspartase-like
Molecular Function GO:0003824 catalytic activity    
superfamily SSF48557 L-aspartase-like 5.2e-168 51-587
no_ID  
Gene3D G3DSA:1.10.275.10 no description 5e-82 21-259
Gene3D G3DSA:1.20.200.10 no description 6.1e-114 260-713