Jatropha Genome Database

JcCB0115651.10  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0115651
Scaffold:
No data.
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9N649_POPTR 931 85.6 92.6 (tr|B9N649) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1116639 PE=4 SV=1
Arabidopsis_pep AT3G14440.1 866 80.7 90.9 | Symbols: NCED3, ATNCED3, STO1, SIS7 | NCED3 (NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 3); 9-cis-epoxycarotenoid dioxygenase | chr3:4831678-4833477 REVERSE
soybean_pep Glyma08g10190.1 733 67.4 80.0  
Medicago_pep IMGA|Medtr5g025250.1 364 38.0 57.3 Carotenoid oxygenase chr05_pseudomolecule_IMGAG_V3 10093326-10091325 E EGN_Mt090430 20090702
grape_pep GSVIVT01038080001 668 64.4 71.5  
castor_bean_cds 30202.m000262 716 81.0 81.0 9-cis-epoxycarotenoid dioxygenase, putative
castor_bean_pep 30202.m000262 929 85.2 92.2 9-cis-epoxycarotenoid dioxygenase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0115651.10 length: 531 aa.
IPR004294 Carotenoid oxygenase
method AccNumber shortName E-value location
HMMPanther PTHR10543 CARTENOID 1.9e-256 19-525
HMMPfam PF03055 RPE65 1.2e-133 57-523
no_ID  
HMMPanther PTHR10543:SF1 9-CIS-EPOXYCAROTENOID 1.9e-256 19-525