Jatropha Genome Database

JcCB0097471.10 (JcS_100319.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0097471
Scaffold:
JcS_100319 JcCB0495181(-) =JcCB0369881(+) =JcCB0569331(+) =JcCB0097471(+) =JcCB0538041(+) =JcCA0003212(+) =JcCB0234291(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9RDA3_RICCO 881 85.6 88.8 (tr|B9RDA3) 3-phosphoshikimate 1-carboxyvinyltransferase OS=Ricinus communis GN=RCOM_1611380 PE=3 SV=1
Arabidopsis_pep AT2G45300.1 766 74.5 82.9 | Symbols: | 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase | chr2:18677518-18679868 FORWARD
soybean_pep Glyma01g33660.1 756 75.7 82.2  
Medicago_pep IMGA|Medtr4g025530.1 758 74.7 82.1 3-phosphoshikimate 1-carboxyvinyltransferase chr04_pseudomolecule_IMGAG_V3 6110814-6104717 E EGN_Mt090430 20090702
grape_pep GSVIVT01027673001 797 76.7 82.9  
castor_bean_cds 30174.m008859 1667 88.9 88.9 3-phosphoshikimate 1-carboxyvinyltransferase, putative
castor_bean_pep 30174.m008859 881 85.6 88.8 3-phosphoshikimate 1-carboxyvinyltransferase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c02131 2952 99.6 99.6  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0097471.10 length: 511 aa.
IPR001986 3-phosphoshikimate 1-carboxyvinyltransferase, core
method AccNumber shortName E-value location
Molecular Function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups    
Gene3D G3DSA:3.65.10.10 no description 6.5e-69 89-295
300-508
HMMPfam PF00275 EPSP_synthase 1e-146 76-505
PatternScan PS00104 EPSP_SYNTHASE_1 NA 163-177
PatternScan PS00885 EPSP_SYNTHASE_2 NA 423-441
IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup
Molecular Function GO:0003866 3-phosphoshikimate 1-carboxyvinyltransferase activity    
HAMAP MF_00210 AROA_MF_00210 33.218 79-511
HMMTigr TIGR01356 aroA: 2.2e-208 83-511
IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta
Molecular Function GO:0003824 catalytic activity    
superfamily SSF55205 EPT/RTPC-like 2.1e-122 70-508
IPR016228 3-phosphoshikimate 1-carboxyvinyltransferase
Molecular Function GO:0003866 3-phosphoshikimate 1-carboxyvinyltransferase activity    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0009073 aromatic amino acid family biosynthetic process    
HMMPIR PIRSF000505 3-phosphoshikimate 3.4e-161 70-510
no_ID  
HMMPanther PTHR21090 AROM/DEHYDROQUINATE 1.2e-205 151-511
HMMPanther PTHR21090:SF3 3-PHOSPHOSHIKIMATE 1.2e-205 151-511
Seg seg seg NA 249-260
328-338