Jatropha Genome Database

JcCB0085561.10 (JcS_101734.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0085561
Scaffold:
JcS_101734 JcCA0285431(-) =JcCB0044401(-) =JcCB0085561(-) =JcCA0282311(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9S0Y9_RICCO 499 93.5 96.2 (tr|B9S0Y9) (S)-2-hydroxy-acid oxidase, putative OS=Ricinus communis GN=RCOM_0631490 PE=4 SV=1
Arabidopsis_pep AT3G14420.5 478 88.9 93.9 | Symbols: | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative | chr3:4821829-4823899 FORWARD
soybean_pep Glyma08g18750.3 490 91.6 95.4  
Medicago_pep IMGA|Medtr1g086560.1 68.2 72.5 90.0 FMN-dependent alpha-hydroxy acid dehydrogenase chr01_pseudomolecule_IMGAG_V3 17173093-17173767 E EGN_Mt090430 20090702
grape_pep GSVIVT01038078001 496 93.5 95.8  
castor_bean_cds 29693.m001985 987 91.1 91.1 (S)-2-hydroxy-acid oxidase, putative
castor_bean_pep 29693.m001985 499 93.5 96.2 (S)-2-hydroxy-acid oxidase, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c00344 1548 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0085561.10 length: 311 aa.
IPR000262 FMN-dependent dehydrogenase
method AccNumber shortName E-value location
Molecular Function GO:0016491 oxidoreductase activity    
HMMPfam PF01070 FMN_dh 6.3e-103 24-285
IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation reduction    
PatternScan PS00557 FMN_HYDROXY_ACID_DH_1 NA 230-236
IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent
Molecular Function GO:0010181 FMN binding    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation reduction    
ProfileScan PS51349 FMN_HYDROXY_ACID_DH_2 84.217 1-285
IPR013785 Aldolase-type TIM barrel
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.20.20.70 no description 3e-91 19-285
no_ID  
HMMPanther PTHR10578 (S)-2-HYDROXY-ACID 7.6e-174 24-285
HMMPanther PTHR10578:SF9 (S)-2-HYDROXY-ACID 7.6e-174 24-285
Seg seg seg NA 69-77
296-310
superfamily SSF51395 FMN-linked 1e-87 18-285