Jatropha Genome Database

JcCB0085061.30 (JcS_100130.30)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0085061
Scaffold:
JcS_100130 JcCA0310961(+) =JcCB0085061(-) =JcCB0235721(+) =JcCA0251661(+) =JcCB0394911(+) =JcCB0174221(+) =JcCA0305451(+) =JcCB0109281(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9ST75_RICCO 177 65.7 73.6 (tr|B9ST75) (S)-2-hydroxy-acid oxidase, putative OS=Ricinus communis GN=RCOM_0684810 PE=4 SV=1
Arabidopsis_pep AT3G14130.1 155 53.7 71.8 | Symbols: | (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative | chr3:4685844-4687852 REVERSE
soybean_pep Glyma08g18750.3 120 51.2 64.2  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01016714001 165 59.0 73.4  
castor_bean_cds 29727.m000487 343 91.3 91.3 (S)-2-hydroxy-acid oxidase, putative
castor_bean_pep 29727.m000487 177 65.7 73.6 (S)-2-hydroxy-acid oxidase, putative
JAT_13201ests gi|268521377|gb|FM894129.1|FM894129 216 100.0 100.0 FM894129 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004314, mRNA sequence
KJC_r1 KJC_c04863 561 99.7 99.7  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0085061.30 length: 161 aa.
IPR000262 FMN-dependent dehydrogenase
method AccNumber shortName E-value location
Molecular Function GO:0016491 oxidoreductase activity    
HMMPfam PF01070 FMN_dh 1.4e-31 39-143
IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent
Molecular Function GO:0010181 FMN binding    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation reduction    
ProfileScan PS51349 FMN_HYDROXY_ACID_DH_2 33.724 1-161
IPR013785 Aldolase-type TIM barrel
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.20.20.70 no description 4.1e-24 39-139
no_ID  
HMMPanther PTHR10578 (S)-2-HYDROXY-ACID 5.4e-53 39-135
HMMPanther PTHR10578:SF9 (S)-2-HYDROXY-ACID 5.4e-53 39-135
Seg seg seg NA 55-62
superfamily SSF51395 FMN-linked 2.4e-23 39-136