Jatropha Genome Database

JcCB0080851.20 (JcS_101610.60)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0080851
Scaffold:
JcS_101610 JcCA0192731(+) =JcCB0041541(+) =JcCB0080851(+) =JcCA0237691(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9T204_RICCO 156 82.6 90.2 (tr|B9T204) Shikimate kinase, chloroplast, putative OS=Ricinus communis GN=RCOM_0210250 PE=3 SV=1
Arabidopsis_pep AT4G39540.2 118 59.6 78.7 | Symbols: | shikimate kinase family protein | chr4:18378561-18380253 FORWARD
soybean_pep Glyma08g14980.1 142 71.7 84.8  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01022229001 149 75.6 88.9  
castor_bean_cds 28256.m000141 264 87.5 87.5 Shikimate kinase, chloroplast precursor, putative
castor_bean_pep 28256.m000141 156 82.6 90.2 Shikimate kinase, chloroplast precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0080851.20 length: 116 aa.
IPR000623 Shikimate kinase
method AccNumber shortName E-value location
Molecular Function GO:0004765 shikimate kinase activity    
Molecular Function GO:0005524 ATP binding    
FPrintScan PR01100 SHIKIMTKNASE 1.6e-09 34-49
58-71
HMMPfam PF01202 SKI 1.8e-16 40-92
no_ID  
Gene3D G3DSA:3.40.50.300 no description 2.5e-16 30-92
HMMPanther PTHR21087 SHIKIMATE 9.6e-22 10-91
superfamily SSF52540 P-loop 7e-17 28-91