Jatropha Genome Database

JcCB0075671.10 (JcS_106479.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0075671
Scaffold:
JcS_106479 JcCA0152871(+) =JcCB0075671(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9T3D7_RICCO 414 96.2 98.1 (tr|B9T3D7) Aquaporin PIP2.1, putative OS=Ricinus communis GN=RCOM_0026890 PE=3 SV=1
Arabidopsis_pep AT3G54820.1 383 88.7 93.0 | Symbols: PIP2D, PIP2;5 | PIP2;5 (PLASMA MEMBRANE INTRINSIC PROTEIN 2;5); water channel | chr3:20302117-20303738 FORWARD
soybean_pep Glyma02g08110.1 402 92.0 96.2  
Medicago_pep IMGA|Medtr7g121470.1 379 87.3 92.5 Major intrinsic protein chr07_pseudomolecule_IMGAG_V3 28607970-28606378 F EGN_Mt090430 20090702
grape_pep GSVIVT01016276001 368 91.9 95.5  
castor_bean_cds 27516.m000174 688 88.6 88.6 Aquaporin PIP2.1, putative
castor_bean_pep 27516.m000174 414 96.2 98.1 Aquaporin PIP2.1, putative
JAT_13201ests gi|237680825|gb|GO247037.1|GO247037 274 85.1 85.1 JcrME_RL0581 Expressed sequence tags from Jatropha curcas root cDNA library Jatropha curcas cDNA, mRNA sequence
KJC_r1 KJC_c01445 1235 99.7 99.7  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0075671.10 length: 213 aa.
IPR000425 Major intrinsic protein
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00783 MINTRINSICP 3.1e-61 13-37
50-69
99-117
135-157
175-195
Gene3D G3DSA:1.20.1080.10 no description 4.5e-53 2-212
HMMPanther PTHR19139 AQUAPORIN 1.8e-147 1-180
HMMPfam PF00230 MIP 6.9e-72 4-192
PatternScan PS00221 MIP NA 31-39
superfamily SSF81338 Aquaporin-like 7.1e-52 3-212
IPR012269 Aquaporin
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0055085 transmembrane transport    
HMMTigr TIGR00861 MIP: 1.8e-70 1-192
no_ID  
HMMPanther PTHR19139:SF27 AQUAPORIN-RELATED 1.8e-147 1-180