Jatropha Genome Database

JcCB0075441.10 (JcS_105502.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0075441
Scaffold:
JcS_105502 JcCB0075441(-) =JcCB0115521(-) =JcCB0471851(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9HJL9_POPTR 892 90.4 94.4 (tr|B9HJL9) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_766241 PE=3 SV=1
Arabidopsis_pep AT5G17330.1 857 86.8 93.2 | Symbols: GAD, GAD1 | GAD; calmodulin binding / glutamate decarboxylase | chr5:5711141-5714839 FORWARD
soybean_pep Glyma02g40840.1 844 86.0 92.6  
Medicago_pep IMGA|Medtr3g086860.1 845 86.7 90.7 Glutamate decarboxylase; chr03_pseudomolecule_IMGAG_V3 20503200-20508077 F EGN_Mt090430 20090702
grape_pep GSVIVT01011565001 873 91.0 96.0  
castor_bean_cds 29780.m001375 908 87.9 87.9 glutamate decarboxylase, putative
castor_bean_pep 27914.m000427 867 88.0 93.6 glutamate decarboxylase, putative
JAT_13201ests gi|268523916|gb|FM890602.1|FM890602 155 82.3 82.3 FM890602 Jatropha curcas embryo 56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000496, mRNA sequence
KJC_r1 KJC_c01163 547 82.6 82.6  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0075441.10 length: 471 aa.
IPR002129 Pyridoxal phosphate-dependent decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0016831 carboxy-lyase activity    
Biological Process GO:0019752 carboxylic acid metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPanther PTHR11999 GROUP 7e-230 46-451
HMMPfam PF00282 Pyridoxal_deC 4.3e-102 33-381
IPR010107 Glutamate decarboxylase
Molecular Function GO:0004351 glutamate decarboxylase activity    
Biological Process GO:0006536 glutamate metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPanther PTHR11999:SF1 GLUTAMATE 7e-230 46-451
HMMTigr TIGR01788 Glu-decarb-GAD: 0 16-445
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 2.4e-29 64-345
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
superfamily SSF53383 PLP-dependent 1.6e-127 3-444