Jatropha Genome Database

JcCB0066311.10 (JcS_200293.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0066311
Scaffold:
JcS_200293 JcCB0066311(-) =JcCD0108385(-) =JcPR04H6BKA(-) =JcPR02ITWTA(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl B9S7K5_RICCO 438 87.7 94.2 (tr|B9S7K5) L-allo-threonine aldolase, putative OS=Ricinus communis GN=RCOM_0609060 PE=4 SV=1
Arabidopsis_pep AT1G08630.5 385 75.3 88.1 | Symbols: THA1 | THA1 (Threonine Aldolase 1); aldehyde-lyase/ threonine aldolase | chr1:2743948-2745685 REVERSE
soybean_pep Glyma20g36590.1 402 81.5 89.3  
Medicago_pep IMGA|Medtr1g093690.1 400 81.1 90.5 Aromatic amino acid beta-eliminating lyase/threonine aldolase; Polynucleotidyl transferase, Ribonuclease H fold; ; chr01_pseudomolecule_IMGAG_V3 19155734-19135194 E EGN_Mt090430 20090702
grape_pep GSVIVT01023525001 376 83.0 89.7  
castor_bean_cds 29680.m001689 630 86.9 86.9 l-allo-threonine aldolase, putative
castor_bean_pep 29680.m001689 438 87.7 94.2 l-allo-threonine aldolase, putative
JAT_13201ests gi|268525442|gb|FM896084.1|FM896084 811 100.0 100.0 FM896084 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003227, mRNA sequence
KJC_r1 KJC_c00419 1344 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0066311.10 length: 243 aa.
IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase
method AccNumber shortName E-value location
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF01212 Beta_elim_lyase 2.6e-72 7-226
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 8.1e-66 1-227
IPR015424 Pyridoxal phosphate-dependent transferase, major domain
superfamily SSF53383 PLP-dependent 2.3e-51 5-227
no_ID  
HMMPanther PTHR10289 L-ALLO-THREONINE 2.5e-100 1-226