Jatropha Genome Database

JcCB0063661.10 (JcS_105303.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0063661
Scaffold:
JcS_105303 JcCB0063661(+) =JcCB0226101(-) =JcCA0237741(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl A9PH58_POPTR 438 87.6 92.4 (tr|A9PH58) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_720961 PE=2 SV=1
Arabidopsis_pep AT4G14550.1 344 75.2 84.9 | Symbols: IAA14, SLR | IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14); protein binding / transcription factor/ transcription repressor | chr4:8348521-8349923 REVERSE
soybean_pep Glyma10g32340.1 381 78.2 84.7  
Medicago_pep IMGA|Medtr1g117600.1 362 78.7 86.2 AUX/IAA protein chr01_pseudomolecule_IMGAG_V3 25280071-25283234 E EGN_Mt090430 20090702
grape_pep GSVIVT01018101001 380 84.5 91.2  
castor_bean_cds 29844.m003174 698 92.1 92.1 Auxin-responsive protein IAA7, putative
castor_bean_pep 29844.m003174 349 94.5 96.2 Auxin-responsive protein IAA7, putative
JAT_13201ests gi|262090943|gb|GT229301.1|GT229301 71.9 85.7 85.7 JC866 Jatropha seeds from fruits at three stages of maturation Jatropha curcas cDNA clone PL21SE.F09.scf 5', mRNA sequence
KJC_r1 KJC_c02807 1195 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0063661.10 length: 241 aa.
IPR011525 Aux/IAA-ARF-dimerisation
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
ProfileScan PS50962 IAA_ARF 30.610 124-224
no_ID  
HMMPfam PF02309 AUX_IAA 7.8e-96 13-233
superfamily SSF54277 CAD 8.7e-10 119-222