Jatropha Genome Database

JcCB0058851.10 (JcS_110867.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0058851
Scaffold:
JcS_110867 JcCB0058851(-) =JcCB0076031(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q8RVH8_9ROSI 362 79.4 83.9 (tr|Q8RVH8) Aux/IAA protein OS=Populus tremula x Populus tremuloides GN=IAA2 PE=2 SV=1
Arabidopsis_pep AT2G22670.2 240 76.9 89.1 | Symbols: IAA8 | IAA8; transcription factor | chr2:9637136-9638459 FORWARD
soybean_pep Glyma14g36390.1 318 68.8 77.2  
Medicago_pep IMGA|Medtr5g032240.1 283 64.2 73.9 AUX/IAA protein chr05_pseudomolecule_IMGAG_V3 13000024-12994499 F EGN_Mt090430 20090702
grape_pep GSVIVT01009238001 347 69.3 74.3  
castor_bean_cds 30170.m013613 583 86.0 86.0 Auxin-responsive protein IAA19, putative
castor_bean_pep 30170.m013613 357 74.4 77.2 Auxin-responsive protein IAA19, putative
JAT_13201ests gi|268521775|gb|FM894371.1|FM894371 444 97.8 97.8 FM894371 Jatropha curcas embryo 71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004712, mRNA sequence
KJC_r1 KJC_c00215 1320 98.4 98.4  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0058851.10 length: 266 aa.
IPR011525 Aux/IAA-ARF-dimerisation
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
ProfileScan PS50962 IAA_ARF 31.166 155-257
no_ID  
HMMPfam PF02309 AUX_IAA 7.5e-80 78-264
Seg seg seg NA 103-117
superfamily SSF54277 CAD 9.2e-10 150-255