Jatropha Genome Database

JcCB0058711.10 (JcS_110859.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0058711
Scaffold:
JcS_110859 JcCB0058711(-) =JcCB0160851(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9IM87_POPTR 459 64.4 76.1 (tr|B9IM87) Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_262537 PE=1 SV=1
Arabidopsis_pep AT3G25570.1 323 52.1 65.1 | Symbols: | adenosylmethionine decarboxylase family protein | chr3:9287413-9288462 REVERSE
soybean_pep Glyma17g07830.1 348 54.0 68.0  
Medicago_pep IMGA|Medtr8g140130.1 219 37.5 55.0 S-adenosylmethionine decarboxylase chr08_pseudomolecule_IMGAG_V3 34332981-34331643 E EGN_Mt090430 20090702
grape_pep GSVIVT01017856001 196 37.0 50.3  
castor_bean_cds 27772.m000038 208 81.4 81.4 s-adenosylmethionine decarboxylase, putative
castor_bean_pep 27772.m000038 429 68.9 79.0 s-adenosylmethionine decarboxylase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0058711.10 length: 363 aa.
IPR001985 S-adenosylmethionine decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0004014 adenosylmethionine decarboxylase activity    
Biological Process GO:0006597 spermine biosynthetic process    
Biological Process GO:0008295 spermidine biosynthetic process    
HMMPanther PTHR11570 S-ADENOSYLMETHIONINE 1.5e-112 11-352
HMMPfam PF01536 SAM_decarbox 4e-117 12-344
IPR016067 S-adenosylmethionine decarboxylase, core
Molecular Function GO:0004014 adenosylmethionine decarboxylase activity    
Biological Process GO:0008295 spermidine biosynthetic process    
Gene3D G3DSA:3.60.90.10 no description 3.1e-99 9-352
superfamily SSF56276 S-adenosylmethionine 6.2e-111 18-346
IPR018166 S-adenosylmethionine decarboxylase, conserved site
PatternScan PS01336 ADOMETDC NA 70-80
IPR018167 S-adenosylmethionine decarboxylase subgroup
HMMPIR PIRSF001355 S-adenosylmethionine 4e-121 7-353
HMMTigr TIGR00535 SAM_DCase: 1.5e-125 15-347
no_ID  
Seg seg seg NA 94-113