Jatropha Genome Database

JcCB0058681.10 (JcS_102293.20)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0058681
Scaffold:
JcS_102293 JcCB0400521(-) =JcCB0058681(-) =JcCB0084011(+) =JcCA0243671(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9T618_RICCO 503 66.6 75.6 (tr|B9T618) Zinc finger protein, putative OS=Ricinus communis GN=RCOM_0025300 PE=4 SV=1
Arabidopsis_pep AT5G57660.1 345 50.8 61.6 | Symbols: ATCOL5, COL5 | zinc finger (B-box type) family protein | chr5:23355573-23356729 FORWARD
soybean_pep Glyma13g01290.1 403 58.5 67.2  
Medicago_pep IMGA|Medtr8g128200.1 400 57.5 67.4 Zinc finger, B-box; CCT chr08_pseudomolecule_IMGAG_V3 29899260-29897234 E EGN_Mt090430 20090702
grape_pep GSVIVT01036037001 319 50.4 60.4  
castor_bean_cds 27506.m000051 172 81.7 81.7 zinc finger protein, putative
castor_bean_pep 27506.m000051 503 66.6 75.6 zinc finger protein, putative
JAT_13201ests gi|268518395|gb|FM888669.1|FM888669 73.8 82.4 82.4 FM888669 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002125, mRNA sequence
KJC_r1 KJC_c01059 1949 99.8 99.8  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0058681.10 length: 367 aa.
IPR000315 Zinc finger, B-box
method AccNumber shortName E-value location
Cellular Component GO:0005622 intracellular    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF00643 zf-B_box 1.4e-06 20-61
63-108
HMMSmart SM00336 no description 4.8e-10 18-65
66-108
ProfileScan PS50119 ZF_BBOX 10.921 18-65
61-108
IPR010402 CCT domain
HMMPfam PF06203 CCT 7.6e-20 294-337
ProfileScan PS51017 CCT 16.787 294-336
no_ID  
Seg seg seg NA 151-163
237-252
278-289