Jatropha Genome Database

JcCB0056041.10 (JcS_110742.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0056041
Scaffold:
JcS_110742 JcCB0056041(-) =JcCB0353641(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9R6T8_RICCO 474 73.0 82.3 (tr|B9R6T8) Branched-chain amino acid aminotransferase, putative OS=Ricinus communis GN=RCOM_1585330 PE=3 SV=1
Arabidopsis_pep AT5G65780.1 384 58.5 75.4 | Symbols: ATBCAT-5 | ATBCAT-5; branched-chain-amino-acid transaminase/ catalytic | chr5:26316418-26318585 FORWARD
soybean_pep Glyma01g40420.1 403 63.2 76.8  
Medicago_pep IMGA|Medtr5g015110.1 398 61.0 75.2 Branched-chain amino acid aminotransferase II chr05_pseudomolecule_IMGAG_V3 4952162-4959265 F EGN_Mt090430 20090702
grape_pep GSVIVT01009276001 357 55.7 73.7  
castor_bean_cds 30170.m013651 658 85.0 85.0 branched-chain amino acid aminotransferase, putative
castor_bean_pep 30170.m013651 474 73.0 82.3 branched-chain amino acid aminotransferase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0056041.10 length: 318 aa.
IPR001544 Aminotransferase, class IV
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPanther PTHR11825 SUBGROUP 6.2e-126 43-318
HMMPfam PF01063 Aminotran_4 2.3e-24 140-318
superfamily SSF56752 D-aminoacid 1.1e-87 11-318
IPR005786 Branched-chain amino acid aminotransferase II
Molecular Function GO:0004084 branched-chain-amino-acid transaminase activity    
Biological Process GO:0009081 branched chain family amino acid metabolic process    
HMMPIR PIRSF006468 Branched-chain 1.9e-91 4-317
HMMPanther PTHR11825:SF2 BRANCHED-CHAIN 6.2e-126 43-318
IPR018300 Aminotransferase, class IV, conserved site
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
PatternScan PS00770 AA_TRANSFER_CLASS_4 NA 248-277
no_ID  
Gene3D G3DSA:3.20.10.10 no description 9.5e-29 216-318
Gene3D G3DSA:3.30.470.10 no description 1.4e-47 11-205
Seg seg seg NA 222-229