Jatropha Genome Database

JcCB0052901.10 (JcS_102799.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0052901
Scaffold:
JcS_102799 JcCD0163632(-) =JcCB0952681(+) =JcCB0052901(-) =JcCA0116611(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
trembl Q944F8_HEVBR 467 87.0 91.3 (tr|Q944F8) Hydroxymethylglutaryl coenzyme A synthase OS=Hevea brasiliensis PE=2 SV=1
Arabidopsis_pep AT4G11820.2 441 81.4 87.4 | Symbols: MVA1 | MVA1; acetyl-CoA C-acetyltransferase/ hydroxymethylglutaryl-CoA synthase | chr4:7109124-7111901 REVERSE
soybean_pep Glyma11g02950.1 459 84.6 88.9  
Medicago_pep IMGA|Medtr5g011170.1 450 82.5 88.9 Hydroxymethylglutaryl-coenzyme A synthase, active site; chr05_pseudomolecule_IMGAG_V3 2975550-2979927 E EGN_Mt090430 20090702
grape_pep GSVIVT01019875001 447 83.4 87.7  
castor_bean_cds 30190.m011109 904 90.1 90.1 hydroxymethylglutaryl-CoA synthase, putative
castor_bean_pep 30190.m011109 464 85.8 90.9 hydroxymethylglutaryl-CoA synthase, putative
JAT_13201ests gi|268517453|gb|FM889171.1|FM889171 785 99.0 99.0 FM889171 Jatropha curcas embryo 35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002760, mRNA sequence
KJC_r1 KJC_c11935 1178 99.5 99.5  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0052901.10 length: 294 aa.
IPR000590 Hydroxymethylglutaryl-coenzyme A synthase, active site
method AccNumber shortName E-value location
Molecular Function GO:0004421 hydroxymethylglutaryl-CoA synthase activity    
Biological Process GO:0008299 isoprenoid biosynthetic process    
PatternScan PS01226 HMG_COA_SYNTHASE NA 105-120
IPR010122 Hydroxymethylglutaryl-CoA synthase, eukaryotic
Molecular Function GO:0004421 hydroxymethylglutaryl-CoA synthase activity    
Biological Process GO:0008299 isoprenoid biosynthetic process    
HMMTigr TIGR01833 HMG-CoA-S_euk: 6.4e-134 1-294
IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal
Molecular Function GO:0004421 hydroxymethylglutaryl-CoA synthase activity    
Biological Process GO:0008299 isoprenoid biosynthetic process    
HMMPfam PF01154 HMG_CoA_synt_N 6.7e-81 2-174
IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal
Molecular Function GO:0004421 hydroxymethylglutaryl-CoA synthase activity    
Biological Process GO:0008299 isoprenoid biosynthetic process    
HMMPfam PF08540 HMG_CoA_synt_C 2e-35 175-253
IPR016039 Thiolase-like
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF53901 Thiolase-like 3.1e-21 4-174
175-252
no_ID  
HMMPanther PTHR11877 HYDROXYMETHYLGLUTARYL-COA 2.1e-147 1-252
Seg seg seg NA 158-176