Jatropha Genome Database

JcCB0050531.20 (JcS_200225.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0050531
Scaffold:
JcS_200225 JcCB0174191(-) =JcCB0050531(-) =JcCB0170011(+) =JcCA0043881(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9SPE4_RICCO 418 77.2 84.8 (tr|B9SPE4) 3-oxo-5-alpha-steroid 4-dehydrogenase, putative OS=Ricinus communis GN=RCOM_0085180 PE=4 SV=1
Arabidopsis_pep AT2G38050.1 346 62.1 76.6 | Symbols: DET2, DWF6, ATDET2 | DET2 (DE-ETIOLATED 2); sterol 5-alpha reductase | chr2:15921303-15922176 REVERSE
soybean_pep Glyma07g17410.1 339 62.5 77.0  
Medicago_pep IMGA|Medtr6g041190.1 76.6 37.1 62.9 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal chr06_pseudomolecule_IMGAG_V3 8788138-8785735 F EGN_Mt090430 20090702
grape_pep GSVIVT01034016001 357 68.6 78.9  
castor_bean_cds 27798.m000584 446 82.5 82.5 3-oxo-5-alpha-steroid 4-dehydrogenase, putative
castor_bean_pep 27798.m000584 418 77.2 84.8 3-oxo-5-alpha-steroid 4-dehydrogenase, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0050531.20 length: 263 aa.
IPR001104 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal
method AccNumber shortName E-value location
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006629 lipid metabolic process    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors    
HMMPfam PF02544 Steroid_dh 5.3e-52 115-263
ProfileScan PS50244 S5A_REDUCTASE 29.202 158-237
IPR016636 3-oxo-5-alpha-steroid 4-dehydrogenase
Molecular Function GO:0003865 3-oxo-5-alpha-steroid 4-dehydrogenase activity    
Biological Process GO:0008202 steroid metabolic process    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055114 oxidation reduction    
HMMPIR PIRSF015596 3-oxo-5-alpha-steroid 1.3e-125 1-263
no_ID  
HMMPanther PTHR10556 3-OXO-5-ALPHA-STEROID 1.7e-140 39-263
HMMPanther PTHR10556:SF3 3-OXO-5-ALPHA-STEROID 1.7e-140 39-263
Seg seg seg NA 58-69