Jatropha Genome Database

JcCB0048021.10 (JcS_102384.10)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0048021
Scaffold:
JcS_102384 JcCB0048021(+) =JcCA0294551(+) =JcCB0390461(+) =JcCB0466591(+)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl B9I5I1_POPTR 528 63.5 77.1 (tr|B9I5I1) Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_243072 PE=4 SV=1
Arabidopsis_pep AT5G23960.1 340 42.4 62.0 | Symbols: ATTPS21, TPS21 | TPS21 (TERPENE SYNTHASE 21); (-)-E-beta-caryophyllene synthase/ alpha-humulene synthase | chr5:8092969-8095128 FORWARD
soybean_pep Glyma12g16990.1 337 41.2 62.4  
Medicago_pep IMGA|Medtr5g081450.1 360 42.4 64.8 Terpene synthase-like; Terpenoid synthase chr05_pseudomolecule_IMGAG_V3 30599999-30603716 E EGN_Mt090430 20090702
grape_pep GSVIVT01014569001 400 47.3 66.6  
castor_bean_cds 30065.m001152 97.6 82.1 82.1 Casbene synthase, chloroplast precursor, putative
castor_bean_pep 30169.m006314 494 57.0 74.6 Casbene synthase, chloroplast precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0048021.10 length: 437 aa.
IPR001906 Terpene synthase-like
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF01397 Terpene_synth 1.5e-17 26-91
IPR005630 Terpene synthase, metal-binding domain
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0016829 lyase activity    
HMMPfam PF03936 Terpene_synth_C 2.2e-87 121-389
IPR008930 Terpenoid cylases/protein prenyltransferase alpha-alpha toroid
superfamily SSF48239 Terpenoid 1.2e-26 26-116
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 3.6e-120 95-427
superfamily SSF48576 Terpenoid 1.4e-118 117-426