Jatropha Genome Database

JcCB0041541.20 (JcS_101610.40)  
Related links:
Predicted Sequence Links:
Genome Sequence: JcCB0041541
Scaffold:
JcS_101610 JcCA0192731(+) =JcCB0041541(+) =JcCB0080851(+) =JcCA0237691(-)
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
trembl Q30CZ9_FAGSY 220 77.6 92.5 (tr|Q30CZ9) Putative shikimate kinase OS=Fagus sylvatica PE=2 SV=1
Arabidopsis_pep AT2G21940.4 202 72.2 87.2 | Symbols: | shikimate kinase, putative | chr2:9351106-9352881 FORWARD
soybean_pep Glyma08g14980.1 212 76.1 87.3  
Medicago_pep --No_Hits--        
grape_pep GSVIVT01022229001 198 69.6 85.9  
castor_bean_cds 28256.m000141 206 87.0 87.0 Shikimate kinase, chloroplast precursor, putative
castor_bean_pep 28644.m000929 147 58.3 80.8 Shikimate kinase, chloroplast precursor, putative
JAT_13201ests --No_Hits--        
KJC_r1 KJC_c11037 813 99.5 99.5  
A list of protein families, domains and functional sites (searches in InterPro)
JcCB0041541.20 length: 157 aa.
IPR000623 Shikimate kinase
method AccNumber shortName E-value location
Molecular Function GO:0004765 shikimate kinase activity    
Molecular Function GO:0005524 ATP binding    
FPrintScan PR01100 SHIKIMTKNASE 1.1e-06 30-39
50-67
HMMPfam PF01202 SKI 1.8e-20 16-125
no_ID  
Gene3D G3DSA:3.40.50.300 no description 2.3e-13 14-127
HMMPanther PTHR21087 SHIKIMATE 5.1e-51 17-153
Seg seg seg NA 2-15
superfamily SSF52540 P-loop 6e-07 14-140