Jatropha Genome Database

JcCB0040361.20

Related links:

GeneModel

Predicted Sequence Links:

Genome Sequence: JcCB0040361

Full length sequence(8856 bp)
Sequence Cut

Init: Term:
reverse complement

Scaffold:

No data.

Results of Blast2 searches (The best-hits are tabulated.):

database	Accession	Score	Iden (%)	Posi (%)	Definition
trembl	B9S9Q2_RICCO	395	53.7	70.9	(tr\|B9S9Q2) Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0520560 PE=3 SV=1
Arabidopsis_pep	AT5G25140.1	246	37.4	57.3	\| Symbols: CYP71B13 \| CYP71B13; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding \| chr5:8672989-8674557 FORWARD
soybean_pep	Glyma07g20430.1	358	49.0	68.0
Medicago_pep	IMGA\|Medtr5g018900.1	353	50.1	68.2	Cytochrome P450 chr05_pseudomolecule_IMGAG_V3 7002232-7003898 E EGN_Mt090430 20090702
grape_pep	GSVIVT01037975001	353	50.4	67.7
castor_bean_cds	29878.m000239	194	80.3	80.3	cytochrome P450, putative
castor_bean_pep	29629.m001350	395	53.7	70.9	cytochrome P450, putative
JAT_13201ests	gi\|237679862\|gb\|GO247167.1\|GO247167	52.0	92.1	92.1	JcrME_RL0711 Expressed sequence tags from Jatropha curcas root cDNA library Jatropha curcas cDNA, mRNA sequence
KJC_r1	KJC_c02434	52.0	92.1	92.1

A list of protein families, domains and functional sites (searches in InterPro)

IPR001128	Cytochrome P450
JcCB0040361.20				length: 356 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0004497	monooxygenase activity
Molecular Function	GO:0005506	iron ion binding
Molecular Function	GO:0009055	electron carrier activity
Molecular Function	GO:0020037	heme binding
Gene3D	G3DSA:1.10.630.10	no description	6.2e-83	2-351
HMMPanther	PTHR19383	CYTOCHROME	1.4e-151	1-313
HMMPfam	PF00067	p450	2.8e-72	21-325
superfamily	SSF48264	Cytochrome	2.6e-89	2-348
IPR002401	Cytochrome P450, E-class, group I
Molecular Function	GO:0004497	monooxygenase activity
Molecular Function	GO:0005506	iron ion binding
Molecular Function	GO:0020037	heme binding
Biological Process	GO:0055114	oxidation reduction
FPrintScan	PR00463	EP450I	4.7e-18	1-4 205-223 246-270 282-292 292-315
IPR017972	Cytochrome P450, conserved site
PatternScan	PS00086	CYTOCHROME_P450	NA	285-294
IPR017973	Cytochrome P450, C-terminal
FPrintScan	PR00385	P450	5.7e-11	153-170 206-217 283-292
no_ID
Coil	coil	coiled-coil	NA	176-197
HMMPanther	PTHR19383:SF170CYTOCHROME	P450,	1.4e-151	1-313
Seg	seg	seg	NA	212-224 299-310